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dotSlide
dotSlide microscope
The dotSlide system is based on the upright BX Olympus research microscopes, which enables a range of modules to be easily added to meet the desired specification. They offer all properties for use in digital virtual microscopy including the extraordinary optical performance and logical structure. Numerous motorised components and the unique modular, ergonomic design ensure maximum efficiency. Each motorised component can be directly controlled, monitored and automated via the software
dotSlide - Exquisite Imaging
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The dotSlide system concept
The individual dotSlide system components have been carefully selected to offer speed, precision and reliability of use. A smooth interaction of microscope, camera, motor stage, computer and software is guaranteed. Three models are available:
- dotSlide MD, manual version
- dotSlide SL, fully automated version, with slide loader
- dotSlide TMA, with tissue microarray module
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Olympus dotSlide 2.0
Pathology, Research & Education

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dotSlide microscope
The dotSlide system is based on the upright BX Olympus research microscopes, which enables a range of modules to be easily added to meet the desired specification. They offer all properties for use in digital virtual microscopy including the extraordinary optical performance and logical structure. Numerous motorised components and the unique modular, ergonomic design ensure maximum efficiency. Each motorised component can be directly controlled, monitored and automated via the software. The standard dotSlide microscope comes with the following: BX51 microscope frame; objectives: 2x PLAPON, 10x, 20x, 40x UPLSAPO; illumination: brightfield with 100 W halogen lamphouse; optional: polarisation, fluorescence, 100 W lamphouse reflected; motorised revolving nosepiece: BX-REMCB
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dotSlide camera
The Peltier cooled, 1376 x 1032 pixel dotSlide camera offers exactly what users in diagnostics, research, development and quality assurance need: high resolution, fast frame rates and very high sensitivity with an excellent signal-to-noise ratio, broad dynamic range and superior image quality. As a result the camera offers images rich in detail and contrast with extraordinary low background noise.
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Objectives
The objectives used with the dotSlide system are all from the advanced Olympus UIS2 range, offering excellent transmission across the entire spectrum. All objectives are plan-corrected, displaying high colour fidelity with optimised contrast to visualise stained specimen in front of a bright, natural background. They are available as either plan apochromats (UPlanSAPO) or plan fluorites (UPlanFL). The motorised nosepiece integrates fully with the system for fast, hands-free objective changes.
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dotSlide motor stage/stage controller
A high-precision X, Y stage gives the system excellent accuracy and repeatability, and can handle standard as well as large slide formats.
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dotSlide workstation
A top-specification PC-based workstation provides all the power required for complex control and processing of both microscope and analysis functions. The large, high-resolution monitor is driven by a dedicated graphic board and a multiformat DVD burner provides easy-to-use optical storage.
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dotSlide in Pathology
With the increasing demand for networking in hospitals and collaborations comes the need for the correct tools. The new dotSlide concept from Olympus has introduced a unique high-speed, whole-slide scanning system, producing digital slide images at high-end microscope quality for pathology. Now, the user can work more flexibly and efficiently to evaluate slides, diagnose and consult colleagues for second opinions, at separate times and in different locations.
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Virtual slide – real diagnosis
Taking an exact copy of an entire slide using the dotSlide system increases the flexibility of case analysis. This unique ability is due to the careful combination of precision optical components, high-quality scanning stage and camera with advanced application software.
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The whole picture
The careful integration of all the components creates a highly flexible system that enables the user to acquire digital slides for diagnosis quickly and effortlessly. The acquisition process starts with generating an overview image of the entire slide. It includes the automatic detection of the specimen to avoid time-consuming scanning of areas where there is no sample on the slide. As a second step, the high-magnification scan is automatically performed, over the whole slide or over smaller, predefined areas of interest using the preselected objective. During the acquisition, thousands of individual images are simultaneously compressed without any loss in quality and stitched together to create a seamless, magnified version of the slide. As a result, this is carried out within minutes, even using high-magnification objectives.
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Worldwide access
The virtual slide image is stored with all the relevant information in such a way that it enables instant, controlled, access from anywhere in the world. This makes it an excellent tool for remote diagnosis (telediagnostics), second-opinion consultations, group discussions and intra-operative diagnosis of frozen sections. The system provides each user with an easy-to-use on-screen control interface, allowing free navigation within the sample. Moreover, the users can control multiple virtual slides and/or other image file formats simultaneously for easy comparison. In this way, they can access virtual slides from wherever they are and therefore do not need to be in their office or even their home country to screen a slide.
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Meeting room
More importantly, as well as giving individual access to the virtual slides, the system also enables collaboration around the globe via the access-controlled conferencing tool. This allows users to be assigned different roles such as moderator, speaker or client. Therefore, second opinions can be requested or difficult case discussions can happen immediately and in real time, with the added benefit of annotation, highlighting and minute taking – a truly revolutionary tool ensuring a new level of efficiency.
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Automatic slide scanning
Many diagnostic, teaching and clinical trials laboratories are faced with a growing number of samples to process and it is therefore more efficient to scan slides in batches and review them later. The Olympus dotSlide system can be fitted with a slide loader, which holds up to 50 slides and is integrated with a bar code reader, giving full traceability and hands-off scanning. This ability also makes it quick and easy to archive slides, producing permanent records.
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Storage and preservation
Access and security
When handling a large number of virtual slides, high-quality, secure and rapid access data storage is an important consideration. Olympus has therefore worked with leading electronic storage providers to establish local, regional and international data access and storage network capabilities. With patients’ samples, privacy is paramount and the system has therefore integrated security settings giving controlled access to the slide image and related data.
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The old and the new
A clear advantage of electronic storage is that slides can be found and loaded quickly and easily, enabling users to quickly reopen a slide for further investigation, access slides for reference purposes, or prepare presentations for conferences and lectures. Furthermore, there is no degradation to the sample over time – the slide image will always be as crisp and clear as the day it was recorded. This is especially advantageous when archiving old or rare samples, which can then be made available for everyone as if they had been copied.
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dotSlide in Research
Life science research has relied heavily on advances in microscopy to move our knowledge forward. The dotSlide system represents such a step forward, offering excellent throughput for extensive image analysis and superb documentation of tissue sections, cell cultures and even tissue microarrays.
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Selection of participants and images to be discussed for online conferences
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Increased efficiency
Microscopy has advanced rapidly over the last few years in terms of the microscope hardware and the techniques used to produce contrast or markers developed to identify molecules, organelles and cell types. Today, we have a much more accurate way of investigating cellular and bimolecular processes. Many experiments use multiple sections of a sample to show the distribution of a certain molecule. Analysing these can take up many hours of the researcher’s time and block the microscope for other users. By scanning the sections on the dotSlide system, the researcher can view their slide away from the microscope and even perform analysis using dedicated imaging software.
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Online conferencing in real time, location-independent
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Global discussion
Due to the unique way the dotSlide images are stored and transmitted, a researcher can invite the rest of their group to view slides of interest, either individually or as a group, whether they are in the same building or situated around the world. The virtual facility offers controllable access for the user, such that with the correct permissions, they can add and edit files. The system is designed to only transmit the amount of data required to provide the desired view and is therefore very quick. The Conference tool window allows a moderator to set up a conference so that all invited clients can see and discuss what the speaker is showing, plus it also records every aspect of the conference, such as the participants’ names, notes and annotations.
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Gallery view and multi-image display*

Selection or exclusion of TMA cores for scanning with minimum effort*
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Tissue microarrays
The ‘microarray’ concept is rapidly developing, giving both high throughput and high content for all molecular ‘-omes’ such as the genome, proteome and metabolome. Arrays are a very cost-efficient way of running highly statistically relevant investigations and, importantly, the array principle applies just as well to tissue samples, known as tissue microarrays (TMAs). TMAs consist of many small tissue cores with a defined diameter that are fixed on a single object carrier. With TMAs, researchers have a powerful way of preparing and staining thousands of different tissue samples under the same conditions and analysing them at once. This has made them an increasingly important and efficient tool for molecular biological research, pharmaceutical drug discovery, gene expression and therapeutic antibody research. The functionality of the dotSlide system can be expanded with a dedicated TMA module, facilitating acquisition and simple analysis of tissue microarrays. This module enables documentation of each core separately, accurately recording its slide and core reference for traceability.
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Multifunction
The dotSlide system comprises a research-level microscope with a colour-perfect digital camera and advanced software, making it a platform with great flexibility, which allows the addition of a range of accessories, from new objectives to fluorescence illumination units.
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Virtual microscopy for education
Teaching new students to analyse pathology samples is an important process. It is, though, beset with the difficult decision of how best to demonstrate the differences between normal samples and many different disease stages that exist for each type of tissue. Up until now, this choice has been restricted to either giving each student a different, but very similar slide, so that they can get the feel of working with a whole sample, or presenting a single image of one sample via projector or online tutorial. Both of these options have severe limitations for teaching in groups. With the introduction of the Olympus dotSlide system, though, this has now changed.
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Guided by annotations and ‘views’, students can identify regions of interest(ROIs) easily
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Digital teaching in classrooms and remotely
From Olympus’ Net Image Server SQL (NIS SQL) database virtual digital slides can be easily accessed, viewed and annotated simply with an Internet browser or with the free OlyVIA image viewer. Each student can review the same sample and control the position and magnification individually as if it were a real slide. The tutor can also work with all the students in real time, showing them how best to analyse effectively, pick out rare cases, or test all students on the same slide.
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Digital teaching in classrooms and remotely
From Olympus’ Net Image Server SQL (NIS SQL) database virtual digital slides can be easily accessed, viewed and annotated simply with an Internet browser or with the free OlyVIA image viewer. Each student can review the same sample and control the position and magnification individually as if it were a real slide. The tutor can also work with all the students in real time, showing them how best to analyse effectively, pick out rare cases, or test all students on the same slide.
Maximise teaching efficiency
Digital SlideBox (SlidePath) is a leading software package that allows academic tutors to build extensive libraries of slides and pathology cases for review by students using the web. Developed with key academic institutes, its design facilitates the creation and editing of educational content, quickly and easily, and is an ideal interactive resource for teaching in any discipline that uses glass slides. Thus, digital microscopy now offers students the opportunity to navigate around a histological section at a variety of magnifications, providing unlimited access to all teaching material outside of the laboratory at any time.
Multimedia e-learning environment
Digital SlideBox’s easy-to-use interface provides users everything needed to produce digital slide-based teaching material via the creation of online histology lab. Innovative features allow the addition of descriptions and questionnaires, as well as multimedia files, such as lecture notes, presentations and videos. Furthermore, the technology allows educators to link to external web resources to maximise existing online content, and provides seamless support for all leading scanner image files. Digital SlideBox also offers simple and powerful tools that provide unparalleled user and content management, which allows classes, courses and assessments to be organised quickly and easily.
Straightforward course assessment tools
Digital SlideBox offers a number of statistical tools and graphical output of assessment results. The Free Hand Annotation tool allows students to draw any shape to annotate irregular objects and Heat Map Tracking (HMT) provides a visual representation of activity on a digital slide by showing the locations on the slide where different magnifications were used. User Morphing is a means of allowing teachers to view student heat maps and any annotations that they have made. This means teachers can provide feedback and review student performances quickly and easily.
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Fully automatic virtual slide scanner
- dotSlide BX microscope frame
- Objectives included: 2x PLAPON, 10x, 20x, 40x UPLSAPO, other objectives may be added optionally, e.g. 100x oil
- Illumination: brightfield with 100 W halogen lamp house, optional: fluorescence, polarisation
- Slide holder for 1” x 3” slides and for 2” x 3” slides
- Multistage insert for batch scanning of four 1’’x 3’’ slides (optional)
- Slide loader for 50 slides 3’ x 1’, with integrated bar code scanner (optional)
- Digital CCD camera: 2/3” CCD camera, 6.45 µm x 6.45 µm pixel size, high sensitivity, high resolution, Peltier cooled, dynamic range of 3 x 12 bit
- dotSlide workstation with Dual XEON™ technology and 500 GB data storage capacity, network interface 100/1,000 Mbit/s Ethernet 4 GB RAM and high-resolution TFT monitor
Data storage solution (optional)
- Dimensions and weight (H x W x D), excluding workstation and monitor: system w/o slide loader: 50 cm x 45 cm x 48 cm, 30 kg; system incl. slide loader: 50 cm x 112 cm x 48 cm, 80 kg
- CE compliance
Resolution
- High-resolution scanning (standard 1x camera adapter): 0.32 µm/pixel (20x/NA 0.75) and 0.16 µm/pixel (40x/NA 0.9)
- Fast scanning (0.63x camera adapter option): 0.51µm/pixel (20x/NA 0.75) and 0.26 µm/pixel (40x/NA 0.9)
Scanning speed
- 10 x 10mm sample area with 20x objective:
- High-resolution scanning < 3 min
- Optional: fast scanning mode < 2 min
Image acquisition
- Automatic tissue finding
- Automatic image montage
- Seamless stitching
- Single button for automatic scanning of up to 50 slides (with optional slide loader)
- Focus points are taken automatically on the sample area. Different focus map algorithms are selectable for an optimal result with different types of samples.
- Data compression takes place during the scanning process without any time delay. Algorithms: JPEG, lossless JPEG, JPEG 2000 or no compression.
Software functions and modules
- View images locally, zoom, crop and rotate images
- Compress images and save images in different file formats
- Insert text annotations and drawings; create views of regions of interest, record audio annotations (sound card, microphone and speakers required)
- Net Image Server software for remote access to virtual slides with dotSlide software, OlyVIA viewer or Web browser, management of virtual slides and user access to images
- Conferencing module for simultaneous and synchronised viewing of virtual slides, conference access control and user management, minute taking tool, chat function
- TMA module to acquire individual images of TMA cores
Analysis
- Integrated measurement functions: distances, areas, circumferences, point count, export results to Microsoft Excel
- Analysis with cell* software packages, e.g. phase analysis to measure shares of tissue types, particle analysis to identify content of tumour cells
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